Insertion junction: CLIP2.011778_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011778
Chromosome:chromosome 6
Location:1467509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260400 FAP287 (1 of 1) PF13881 - Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD_2); Ubiquitin-like Flagellar Associated Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCTCCTATCTACCTTACACGGCACTTTCCACGCGGAGTCACCCTCC
Internal bar code:AACTTTTGCGACATATTGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1864
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGCTCAAGGACAAGGTG
Suggested primer 2:CCCATGCACTCTGTCCTGTT