Insertion junction: CLIP2.011785_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011785
Chromosome:chromosome 11
Location:4321139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482550 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGCCTCTGCCCACCAGGTCAACAACGGCCGCTACCGAGACCTCTGG
Internal bar code:ACCCTGGTAGTGATCGTTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:98
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCACAACAAACCCACG
Suggested primer 2:CGGAGCTACTCAAGGTGGTG