Insertion junction: CLIP2.011799_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011799
Chromosome:chromosome 2
Location:5388862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTAAACCAAGGCCCAGCAGGGGTTATTTTCACCAGTCCCAATAAGA
Internal bar code:CATCTTATTCTAAGGTGAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAACACACCGATCGCAGC
Suggested primer 2:GAAGGGTTTGGAACACGTGC