Insertion junction: CLIP2.011799_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011799
Chromosome:chromosome 2
Location:5388888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGGCTACTCCCCCCCTTCGATGTAGCTTGAGCTGGTATCTACACCC
Internal bar code:CATCTTATTCTAAGGTGAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1965
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGTTTGGAACACGTGC
Suggested primer 2:AAAAACACACCGATCGCAGC