Insertion junction: CLIP2.011809_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011809
Chromosome:chromosome 12
Location:5792622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532850 PHR3 (1 of 4) PF00497 - Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3); Putative photolyase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACCGCTAACGACCTGGCCGGTCGCACGGTGTGCCTGGAGGAGGGTGA
Internal bar code:TTTATCGGTTTAATGGTGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5127
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAACATGAACACACGCT
Suggested primer 2:GCTCGGCCGACTGATTATCA