Insertion junction: CLIP2.011818_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011818
Chromosome:chromosome 3
Location:7698143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203730 DEGO1,DEG12 Inactive Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCAGGCAGGTACACGCGCACCTGCGTGCACACGCGCGCACGCAAAAG
Internal bar code:TTATTTTTACAAAACGAAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGGGCATACGTACACG
Suggested primer 2:GCAGGTGCTGGATTTGGTTG