Insertion junction: CLIP2.011823_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011823
Chromosome:chromosome 16
Location:4975145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686300 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTACACCCGTCGGCCCCCCGATCACCAAGCGCGATACCCCCACGCAA
Internal bar code:TTTGCCTGGGGTTTGATAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1314
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTATGGAGGGAAGTGTG
Suggested primer 2:TCGTCATATCAGCACGAGCC