Insertion junction: CLIP2.011827_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011827
Chromosome:chromosome 17
Location:3828126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGTAGGCCACCAGGTCCGCAGTGCCGCTCTTGACCAGCTCCTCGCC
Internal bar code:CGAGTAATCACAGTGGATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4357
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:144
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:144

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTCACCTGCTTTCATCT
Suggested primer 2:AGCGTAGAGTCAACGGCAAA