Insertion junction: CLIP2.011828_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011828
Chromosome:chromosome 3
Location:5603656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGCGCACCTCCGGGGTGCAGTGCCTCGGCGGCACGTCCCGTGCTGC
Internal bar code:GAGGCTGAGGACAGTTCTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGGATGATGTCAAAGCA
Suggested primer 2:CGTCTCCTCCGTCATACGTG