Insertion junction: CLIP2.011833_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011833
Chromosome:chromosome 12
Location:5872547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGCCAGGGTCGCACTCTTAAGCCCGGGAGCATGTTTCTAGTCTCCTT
Internal bar code:GGTTTAGCCCGCTCGTTGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2309
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCAACATCACTCCTGC
Suggested primer 2:GTGCCTTGTTCACCAACGAC