Insertion junction: CLIP2.011834_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011834
Chromosome:chromosome 2
Location:5400443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113751 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATTCCCGAGCCTCCCCCGCCAGCCTTTCTGCACCCCCTTCCCATCAT
Internal bar code:GAGCACCATGCACCTTTACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACTTCAAGCGACCCGG
Suggested primer 2:AGGAGGAGGTGAGTACGACC