Insertion junction: CLIP2.011834_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011834
Chromosome:chromosome 2
Location:5400571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113751 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGTGCCTGCCGTACGGGGCCCTCAGTCTGGGCCCATCATACCACTG
Internal bar code:TTCGCCAATGGTTCCCGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1163
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGGTGAGTACGACC
Suggested primer 2:AACTACTTCAAGCGACCCGG