Insertion junction: CLIP2.011840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011840
Chromosome:chromosome 16
Location:7020218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673729 CPN11 Chaperonin 11, chloroplastic; (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGCGCCACGCGCGCTCAGGCCCGAACGCTCCCCTATCGCCATTCTT
Internal bar code:ACAAGCGCCAGGCTAGCAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3921
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCACCTAGTTTGGGTCG
Suggested primer 2:CAGCAATATCCGCCAGCAAC