Insertion junction: CLIP2.011841_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011841
Chromosome:chromosome 9
Location:6027003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412550 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTCATCCCCCGCCGCTGCCCATCACCTGGATGCGCATACGCGGCTGT
Internal bar code:AGCCGTCCATTAAAGCAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTCTGCGACTGGTTGT
Suggested primer 2:CCCCGCTGACAGATACATCC