Insertion junction: CLIP2.011842_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011842
Chromosome:chromosome 6
Location:1870687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263950 (1 of 1) 3.6.3.9 - Sodium/potassium-exchanging ATPase / Sodium/potassium-transporting ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCTGCAAGAGAAGCTGCAACCGCATCAGGTAAAGAGTATAGGGCG
Internal bar code:CACTCACAGTAACTATATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGACTTCAACCTGCTCA
Suggested primer 2:CCTTTCAGCCCGCTCTTACA