Insertion junction: CLIP2.011850_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011850
Chromosome:chromosome 12
Location:8149636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552150 (1 of 1) PF00069//PF13185 - Protein kinase domain (Pkinase) // GAF domain (GAF_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGGCCTACCGCTGCTGGCGCAAGGACCCCAAGGCGCGCCCGCCCT
Internal bar code:TGAAGTGTTTGAATGACAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATGCCGCCGTCCATTTC
Suggested primer 2:GTGGTCTCACGTGCTCTTCA