Insertion junction: CLIP2.011852_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011852
Chromosome:chromosome 8
Location:4191039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383800 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTCGCGAGGTGGGCCTAACTATCGGTAACGCGGCTGGAACTCGGCTT
Internal bar code:TATCAGATCCACGATATAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1173
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TACACTAGTGGGAGGAGGCC
Suggested primer 2:GCAGAGCGGGATACAGACTC