Insertion junction: CLIP2.011853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011853
Chromosome:chromosome 13
Location:4453278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602650 (1 of 1) PTHR12231//PTHR12231:SF150 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGTTGCGAGGCGCGCATCTGTATGCACTGAGGTAGATTGGTCTAGGT
Internal bar code:GCTAACGATTATCGACCGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTGGATGAGGTTGGGG
Suggested primer 2:GTGTGTGTGTAACCAACGGC