Insertion junction: CLIP2.011859_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011859
Chromosome:chromosome 6
Location:3306003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCACACATGCACGCAACCCCACGCCACCCCCGCCCGCCCCCGCAGA
Internal bar code:GATTTGCGGGTTGGAGCGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAACCTCTCACAACCCC
Suggested primer 2:GTACCCACACAAACACACGC