Insertion junction: CLIP2.011865_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011865
Chromosome:chromosome 12
Location:7249277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGGGCCGCACTTCCACGGACACGGACACATGCACCACAGCGCCGCCG
Internal bar code:CAATCTCTTTATTCGTTCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCCGTTGTGTCGCTTG
Suggested primer 2:GTGTGTGCGTGTGTGTGTTT