Insertion junction: CLIP2.011866_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011866
Chromosome:chromosome 10
Location:2788817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438500 CPK3,MOT54,FAP264 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 264 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCGTACCGTAGTGGACGACGTGCATTGCCTCAGACTCCAAGTACTT
Internal bar code:TTGAAACGGGTTTTCGCCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3323
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAAGGGCCCAACATTGC
Suggested primer 2:GTGTTCTGTCCAGGGATGGG