Insertion junction: CLIP2.011866_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011866
Chromosome:chromosome 10
Location:2788825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438500 CPK3,MOT54,FAP264 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 264 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGGCAGACATGGGCCCCGGCAGGGGTGCCGGGGGCGGGCCTGCCTCC
Internal bar code:TAAATTGGCCGGGACTCTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTCTGTCCAGGGATGGG
Suggested primer 2:CTTGAAGGGCCCAACATTGC