Insertion junction: CLIP2.011868_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011868
Chromosome:chromosome 10
Location:3949819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446850 (1 of 10) PF02373 - JmjC domain, hydroxylase (JmjC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGAAGGGGTTCTGACCAGACGCGTACTTTCAAGTGCGTAAATGCGAA
Internal bar code:CAGGTCGAGTTTAGTGTGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1825
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACGGAGTGAGTGCGGTA
Suggested primer 2:CCAGTCAGCAATGTCTCGGT