Insertion junction: CLIP2.011868_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011868
Chromosome:chromosome 10
Location:3949821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446850 (1 of 10) PF02373 - JmjC domain, hydroxylase (JmjC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGCCTGCAGCTGCTACGAGACGAAGCTGGGCGTTTCGGGCCAGATG
Internal bar code:TTGAAGGTGACAGCTTGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCAGCAATGTCTCGGT
Suggested primer 2:TCTACGGAGTGAGTGCGGTA