Insertion junction: CLIP2.011869_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011869
Chromosome:chromosome 1
Location:6858214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049200 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATACAGTGGACAAACGGGACAACCACCTACTTTGTCAGCAATAACAA
Internal bar code:GGTAGTCCGACCTAGTGGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2610
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTATATGCAACGCGGGCG
Suggested primer 2:GCTTCATCGGAGAGGTCGAG