Insertion junction: CLIP2.011870_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011870
Chromosome:chromosome 17
Location:3544999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGGCAGTAGCAACGGAAGGAGCAAGGTAGCTGTCGGGAAGGGGGCA
Internal bar code:GAAATATGGGTTTATATCCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5170
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGGCCACTGTTTCAAG
Suggested primer 2:GTGTCACAAGCACGAGCATG