Insertion junction: CLIP2.011882_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011882
Chromosome:chromosome 16
Location:6194187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676800 (1 of 1) PTHR11017//PTHR11017:SF145//PTHR11017:SF158//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTGCGGCCCGCGCGTGCGCATGGGGCTCCACGCCGGCGTGCACTCGG
Internal bar code:AAAGTGCAATGTTTAGTAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2353
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGCAAGCATACATCCG
Suggested primer 2:AAGCATCACCCACCATCCTG