Insertion junction: CLIP2.011885_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011885
Chromosome:chromosome 2
Location:3073567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095900 ROC114,ROC108 Rhythm Of Chloroplast 114; (1 of 13) PF00646 - F-box domain (F-box) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAAAGCATCCTTCGTTTGTGATGGCCTGCCTAGATGAACCGTCGACC
Internal bar code:GTGGCACTTCAGGGGCTACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1023
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCCCCCGCATCAAGAAG
Suggested primer 2:GAGCCACCACTACACACGAA