Insertion junction: CLIP2.011894_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011894
Chromosome:chromosome 13
Location:3905713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTGCTCCTGACCATGAGCTCCTAACACACCCTACCTTTCCCCCCCT
Internal bar code:GTCGGATACCCCAAGGGCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAAGAGACTGCACGAGC
Suggested primer 2:ATTCACATCCTGCACCCGTT