Insertion junction: CLIP2.011900_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011900
Chromosome:chromosome 12
Location:5717133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532250 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGCTCTGGGGTTGACGGGCGGTGCTGGCGGTGCTGGTGGGGGCAG
Internal bar code:ATTGTTACGATACCAACGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1514
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAAGCTAGCCCTTTCGT
Suggested primer 2:AGGAACATGTCGCTTCCTGG