Insertion junction: CLIP2.011901_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011901
Chromosome:chromosome 10
Location:5877437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g460600 CYN53 (1 of 2) PTHR11071//PTHR11071:SF297 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN; Cyclophilin 53 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGCGAGGGGGGCAAGACGACTACGGCGGCACGGGCAGCAGCCGGCTG
Internal bar code:CTAGAACCATGGGCCTAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1927
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACGACGAGACCATGTT
Suggested primer 2:TGTCACGTGGACCCAAACAA