Insertion junction: CLIP2.011906_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011906
Chromosome:chromosome 3
Location:2401038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158550 SRH4 (1 of 1) K14437 - chromodomain-helicase-DNA-binding protein 7 [EC:3.6.4.12] (CHD7); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGGGTGGGTGCCGGCGGGGTGCTTCGGCAGGGGGTGCTCGGGTCTG
Internal bar code:GATTTAGCATACAGTTCTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1031
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTCAAACTGCGGGAGAG
Suggested primer 2:CGCACGGAAAAAGGCAAAGA