Insertion junction: CLIP2.011916_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011916
Chromosome:chromosome 10
Location:1550017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCCCAAACCGTTTCCCTCGGCGTTTGGAGTTCGGACTCACTTTGGG
Internal bar code:CGCAGTCGTTTGCTGGAGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1249
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCGTGGAACTCTAAAAG
Suggested primer 2:TCTAGCCACTCAGCCCTCAT