Insertion junction: CLIP2.011937_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011937
Chromosome:chromosome 1
Location:6849967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049132 (1 of 1) PTHR23097//PTHR23097:SF105 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCGGCATGAAGTACGGCATCTTCTGGACGGTGTGGAAGCTGTGCCA
Internal bar code:AATGAAGAGCAATTTATAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGCACGCCGATTACTGG
Suggested primer 2:ATCAACCACGCTGTAACCGT