Insertion junction: CLIP2.011943_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011943
Chromosome:chromosome 13
Location:967388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTATGTGTGTAGGCGTGTGCGTGTAGGCGTGCATGCGTGTGCGTGTA
Internal bar code:CTTAAGGAACTCTACCTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:697
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGGCTGTACGAGGTAC
Suggested primer 2:CAATGCTGCACCCACACTTC