Insertion junction: CLIP2.011948_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011948
Chromosome:chromosome 12
Location:5821560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533050 (1 of 1) K14538 - nuclear GTP-binding protein (NUG1, GNL3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGCGGACGACGACGAGGACGGCATGCTGGCGGCGGCGGCGGCGGCG
Internal bar code:CACACTCCGGGGCCCCGGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACAACAAACAAGCGGCA
Suggested primer 2:CGGGTGGGGTTGTAACTACC