Insertion junction: CLIP2.011949_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011949
Chromosome:chromosome 3
Location:5980643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189350 (1 of 1) PTHR36352:SF1 - EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTGATTGCCATGATAGTTTGAAAAAGATGCCAACCCACGATGCCAA
Internal bar code:CGGCACACTTGCTAGTAAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2207
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACCGGGCGACATCATAG
Suggested primer 2:CTCACCCCGCCTTACTTGTT