Insertion junction: CLIP2.011951_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011951
Chromosome:chromosome 2
Location:5817118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117150 (1 of 1) PTHR23077:SF10 - PACHYTENE CHECKPOINT PROTEIN 2 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCCGCCGCCACCTGCTGCTGCAGCACGGGGTCCTCGGCATCGGCG
Internal bar code:GGGCGTGTTACTACCAGCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1025
LEAP-Seq percent confirming:69.697
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCCAACCTACACACCC
Suggested primer 2:CCCGTGTGAGTAACGTGACA