Insertion junction: CLIP2.011965_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011965
Chromosome:chromosome 10
Location:5388159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457100 (1 of 1) 1.13.11.79 - 5,6-dimethylbenzimidazole synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCACGTGCTGCACAAAATGCCCGCCGGCTGCCACCATCGGTCGCCCT
Internal bar code:TTATTGATTGTGGCTACTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACCCCCTTCTTCCCGTG
Suggested primer 2:CAATTGTCTGCGCGGAGATG