Insertion junction: CLIP2.011967_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011967
Chromosome:chromosome 7
Location:2324562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTCTAAACGGCCTAAGCCCTGCAGGGTCAAAAGCAGGCACGGCACGAT
Internal bar code:AATGCCGGTCATACTTGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1373
LEAP-Seq percent confirming:39.7727
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCGAGCTTATTCCCTCC
Suggested primer 2:GGGCAGAGCAACTTCATCCT