Insertion junction: CLIP2.011967_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011967
Chromosome:chromosome 7
Location:2324570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGAACGAATGCTTCAAATCGAGACTGAGCCGGAGCCGGAGCCCAAGGA
Internal bar code:AATGCCGGTCATACTTGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:15.5844
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGAGCAACTTCATCCT
Suggested primer 2:CCGTCGAGCTTATTCCCTCC