Insertion junction: CLIP2.011972_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011972
Chromosome:chromosome 3
Location:5038723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179921 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGCAAGCCCTGGGTTCAACTTCGGTTCACTTCGGCGCTAGCCCAGCC
Internal bar code:ACACCTTATCGGTGGATTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3853
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTATCGCAAGCGGACAGT
Suggested primer 2:CCCCTTGTAAGTGCCTCCAG