Insertion junction: CLIP2.011972_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011972
Chromosome:chromosome 3
Location:5038724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179921 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGCAAATATACGATTATGGCCCCTGCTCCAGCCGGTTCACTGGCAT
Internal bar code:ACACCTTATCGGTGGATTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTGTAAGTGCCTCCAG
Suggested primer 2:TTGTATCGCAAGCGGACAGT