Insertion junction: CLIP2.011974_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011974
Chromosome:chromosome 9
Location:421250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800978 (1 of 4) PF03235 - Protein of unknown function DUF262 (DUF262) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCACGACCCCTTCAACTACTACAAGGCGATGAACCAGGTGAGAGGCT
Internal bar code:CTCCACAAGGAAAGAAATGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATAGCCCTTTCCTCCGT
Suggested primer 2:CTTGCATTGGCTGTATCCGC