Insertion junction: CLIP2.011981_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011981
Chromosome:chromosome 4
Location:2266184
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCACCTATACGTTTCAGAAAGCGGCAGTTGACGAAAACTTGGGCAACA
Internal bar code:AGTGGACCATCGTAATCGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:57.5
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGAGATACAGACTCCAC
Suggested primer 2:TCAGTCGTCTAGGTCCAGCA