Insertion junction: CLIP2.011989_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011989
Chromosome:chromosome 6
Location:7725715
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302700 (1 of 1) PF00560//PF13516 - Leucine Rich Repeat (LRR_1) // Leucine Rich repeat (LRR_6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGGTGCAGGCGTGCGGCGAACAGCGCAGGGCGCATGGAGCTCGTCG
Internal bar code:AACAACTTGTATATCGTGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACCATCACCGCACGTT
Suggested primer 2:ATCACCGACCTCGCAAAGTT