Insertion junction: CLIP2.012004_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.012004
Chromosome:chromosome 16
Location:7518015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682475 (1 of 1) PTHR34496//PTHR34496:SF1 - FAMILY NOT NAMED // GLCNAC TRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGCGCCTGCCCGGGGGTTGCCGGCCGCGACGCCTGTCCCTGCCTGT
Internal bar code:CCGAAACATTCGCGGCCTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:886
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGAGGAAGGCGATGGGGA
Suggested primer 2:GGCTCTCGGCTGATACTCAC