Insertion junction: CLIP2.012006_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012006
Chromosome:chromosome 16
Location:30993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g696050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGGCTGGGGCTTTGGCGAGGGGGGGGGCGCCCATGCCAGAGTAGGAA
Internal bar code:CATGAAATCGGCTCAGGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:374
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGATGGGGTGTATGGACG
Suggested primer 2:AGATCCCACTCCGTGCAAAG