Insertion junction: CLIP2.012010_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012010
Chromosome:chromosome 16
Location:1900894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGTCACCCACCTTTCGACAGTCGGCGGGTGGCTGCCCGGGCAGCTGC
Internal bar code:GCGAGCCGTAGCAAATCGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCATGCCAGCCTTGTA
Suggested primer 2:GCTTGCCCATTCTTAACCGC