Insertion junction: CLIP2.012012_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012012
Chromosome:chromosome 9
Location:831224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403750 HAD6 Halo-acid dehalogenase-like hydrolase; (1 of 1) PTHR12725:SF55 - F14L17.7 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACCCCACTACAATTACAGTCAGGTAGCCGGGCCGCCGTACAACTAC
Internal bar code:GACCAACGCGGGGACTGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTTGAGGAGAGCTAGCG
Suggested primer 2:CCCCATGCGTCTCTCTTGAG